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In this study, we innovatively utilized the method of the MD simulation software GROMACS to conduct in-depth and rigorous verification of the binding stability between the hit compounds and the target ...

In contrast, the B-cell epitope was 97.5% conserved (Figure 3A). Additionally, we performed sequence logo analysis using WebLogo, which visually represents the frequency of each amino acid at specific ...

The best results are highlighted in clear gray and control molecules are in bold Afterwards molecular dynamics (DM) simulations were performed using the GROMACS version 5.0.1 program. 42 The DM ...